Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887738.1_cds_XP_016442234.1_37518
CDS Infomation

[gene=LOC107767670] [db_xref=GeneID:107767670] [protein=COP9 signalosome complex subunit 2] [protein_id=XP_016442234.1] [location=join(49460..49469,49571..49663,50481..50559,51515..51755,51862..51936,52017..52151,56364..56551,57411..57479,57595..57685,57784..57918,58267..58379,58474..58564)] [gbkey=CDS]
Sequence

ATGGGTTCTGATGCGGATATGGAGGATTATGGATTTGAGTACTCGGACGAGGAGCAGGAA
GAGCAAGATGTTGATATCGAGAATCAATACTACAATTCTAAAGGTTTGGTTGAAACTGAT
CCTGAAGGAGCACTTGAGGGTTTTGCTGAAGTAGTACGTATGGAACCTGAGAAGGCAGAG
TGGGGATTTAAAGCTTTAAAGCAAACTGTTAAGCTTTACTATAAGCTAGGGAAGTTCAAG
GAAATGATGGATGCTTATCGAGAAATGCTGACCTACATAAAATCAGCAGTGACACGGAAC
TATAGTGAGAAGTGTATAAACAGTATTATGGATTTTGTTTCTGGATCAGCTAGTCAGAAC
TTCAGCTTTCTGCAGGAGTTCTACCAGACAACACTGAAAGCCCTTGAAGAGGCTAAGAAT
GAGAGGTTATGGTTCAAGACGAATCTAAAGCTTTGCAAGATTTGGTTTGACATTGGGGAA
TATGGACGAATGAGCAAGATTCTGAAAGAGCTCCACAAATCCTGTAAGAAAGAAGATGGC
ACTGATGATCAGAAAAAAGGGACACAATTGTTGGAGGTATATGCAATTGAGATTCAAATG
TACACAGAGATGAAAAATAACAAAAAACTGAAGGCACTGTACAACAAAGCACTTTCAGTC
AAGTCAGCAATCCCTCATCCAAGAATAATGGGAATCATTCGCGAATGTGGAGGTAAAATG
CATATGGCAGAGAGGAAGTGGGCAGAGGCAGCTACAGACTTCTTTGAAGCTTTCAAGAAC
TATGATGAAGCTGGGAATCATAGGCGTATCCAGTGCCTAAAGTACTTGGTTCTGGCAAAT
ATGCTGATGGAATCTGAAGTTAACCCTTTTGATGGCCAAGAAGCTAAACCTTACAAAAAT
GACCCCGAGATATTGGCAATGACAAACCTTATCGCAGCATACCAACGAAATGAGATCTTG
GAGTTCGAGAAAATTCTTAAGAGTAACAGACGGACAATAATGGATGACCCATTCATTCGG
AATTACATTGAAGATCTTTTGAGGAATGTCAGAACCCAGGTTTTACTGAAGCTCATCAAG
CCTTACACAAGAATCCGGATTCCCTTCATATCCAAGGAGCTGAATGTGCCGGAAAAGGAT
GTTGAAGACTTGTTGGTCTCACTAATCTTGGATAACCGGATTGATGGCCACATTGATCAA
GTGAACCGACTGCTAGAGCGTGGCGACAGTTCAAAAGGGATGAAGAAGTATACTGCCATA
GATAAATGGAACACACAACTAAGGTCTCTATACCAGACTGTTGGCAACAGAGTATGTTGA

Peptide Sequence

PEP ID

XP_016442234.1
PEP Infomation

PREDICTED: COP9 signalosome complex subunit 2 [Nicotiana tabacum]
Sequence

MGSDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGLVETDPEGALEGFAEVVRMEPEKAE
WGFKALKQTVKLYYKLGKFKEMMDAYREMLTYIKSAVTRNYSEKCINSIMDFVSGSASQN
FSFLQEFYQTTLKALEEAKNERLWFKTNLKLCKIWFDIGEYGRMSKILKELHKSCKKEDG
TDDQKKGTQLLEVYAIEIQMYTEMKNNKKLKALYNKALSVKSAIPHPRIMGIIRECGGKM
HMAERKWAEAATDFFEAFKNYDEAGNHRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKN
DPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLRNVRTQVLLKLIK
PYTRIRIPFISKELNVPEKDVEDLLVSLILDNRIDGHIDQVNRLLERGDSSKGMKKYTAI
DKWNTQLRSLYQTVGNRVC

Transcript Sequence

Gene sequence data has not been registered.